Domain: biofilm

Claims

recirculating pipes
downstream pipes

Tests:

FISH
label: FISH; delay: 35; isInt: true; description: fish.html;
keywords: probe; fish; 16SrRNA; 16S rRNA; T-RFLP; species composition; community analysis; community structure; phylogeny; phylogenetic analysis;

Parameter
primer set label: primer set cost: 10000.0 delay: 35 selection: multiple exclusive: false	location sample label: location sample delay: 35 selection: multiple exclusive: false
value methanogens all bacteria	location checkpoint 12 checkpoint 10 checkpoint 8 checkpoint 7 checkpoint 6 checkpoint 4 checkpoint 5 checkpoint 3 checkpoint 11 checkpoint 9 checkpoint 2 checkpoint 1

Culturing
label: Culturing; isInt: true; description: cultureIsolation.html;
keywords: culturing; isolate bacteria; gram stain; grow bacteria; enumerate bacteria; sample bacteria; analyze bacteria; culture bacteria; microbiology; bacteria growth; bacteria; viable;

Parameter
Location of Sample label: Location of Sample selection: multiple exclusive: true	Temperature label: Temperature selection: multiple exclusive: true	Growth Medium label: Growth Medium selection: multiple exclusive: true	Morphological Analysis label: Morphological Analysis selection: multiple exclusive: false
list 1 check point 1 check point 2 check point 3 check point 4 check point 5 check point 6 check point 7 check point 8 check point 9 check point 10 check point 11 check point 12	list 1 25C 30C 37C	aerobic nutrient R2A NH4/NO2 oxidizers H2S,So oxidizers Fe oxidizers(acidic pH) Fe oxidizers(neutral pH) Mn oxidizers anaerobic Methanogenic enrichment SRB R2A+nitrate nutrient+nitrate rich sugar	list 1 total #'s default: true cost: 1000.0 delay: 7 colony morphotypes cost: 2000.0 delay: 7 gram stain cost: 10000.0 delay: 14

Hydrology
label: Hydrology; isInt: false; description: hydrology.html;
keywords: Fluid; fluid dynamics; water flow; hydrodynamics; hydrology;

Parameter
Location of Sample label: Location of Sample selection: multiple mainCost: 2000.0 exclusive: false initialCostPerUnit: 500.0
list 1 check point 1 delay: 1 lateDelay: 7 lateDate: 15 check point 2 delay: 1 check point 3 delay: 1 check point 4 delay: 1 check point 5 delay: 1 check point 6 delay: 1 check point 7 delay: 1 check point 8 delay: 1 check point 9 delay: 1 lateDelay: 7 lateDate: 15 check point 10 delay: 1 lateDelay: 7 lateDate: 15 check point 11 delay: 1 lateDelay: 7 lateDate: 15 check point 12 delay: 1 lateDelay: 7 lateDate: 15

Water Chemistry
label: Water Chemistry; delay: 3; isInt: false; description: waterChemistry.html;
keywords: water chemistry; chemistry; chemical analysis; oxygen; nitrate; sulfate; carbon; phosphorus; phosphor; ph; water quality; sulfur; temperature; do; Dissolved Oxygen; s;

Parameter
Location of Sample label: Location of Sample delay: 3 selection: multiple exclusive: true	Test variable label: Test variable cost: 50.0 delay: 3 selection: multiple exclusive: false
list 1 check point 1 check point 2 cost: 100.0 check point 3 cost: 100.0 check point 4 cost: 100.0 check point 5 cost: 100.0 check point 6 cost: 100.0 check point 7 cost: 100.0 check point 8 cost: 100.0 check point 9 check point 10 check point 11 check point 12	list 1 pH dissolved oxygen PO4 Cl- H2S SO4 NO3 NO2 NH4